STRINGSTRING
PG_2186 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2186" - Transcriptional regulator in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2186Transcriptional regulator (111 aa)    
Predicted Functional Partners:
PG_2185
Transporter (438 aa)
 
          0.959
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (382 aa)
 
          0.605
lysC
Aspartate kinase (446 aa)
 
          0.563
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (295 aa)
              0.546
PG_0680
RND family efflux transporter MFP subunit (417 aa)
   
          0.512
ftsE
Cell-division ATP-binding protein (246 aa)
              0.462
PG_1715
Hypothetical protein (887 aa)
   
          0.458
PG_0226
Transglutaminase (897 aa)
   
          0.456
PG_0682
ABC transporter permease (783 aa)
   
          0.416
PG_1571
Metallo-beta-lactamase superfamily protein (471 aa)
   
          0.411
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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