STRINGSTRING
PG_2202 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2202" - Holliday junction resolvase-like protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2202Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (138 aa)    
Predicted Functional Partners:
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (189 aa)
              0.739
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (210 aa)
       
    0.695
PG_2200
Hypothetical protein (695 aa)
              0.663
nadC
Nicotinate-nucleotide pyrophosphorylase (275 aa)
       
    0.538
secDF
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (981 aa)
              0.533
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (518 aa)
       
    0.532
PG_2199
ABC transporter ATP-binding protein (645 aa)
              0.519
PG_1745
Phosphoribulokinase (529 aa)
              0.514
PG_0807
NusB family protein; Involved in the transcription termination process (364 aa)
 
        0.492
recJ
single-stranded-DNA-specific exonuclease RecJ (584 aa)
   
      0.489
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (12%) [HD]