STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0361Conserved domain protein; Similar to SP:P37742, GB:L11721, SP:P24175, GB:M77127, PID:147165, PID:304879, PID:415624, GB:U00096, PID:1407617, PID:1736750, PID:1736754, and PID:1788361; identified by sequence similarity; putative. (435 aa)    
Predicted Functional Partners:
PG_0360
lemA protein; Similar to GB:S46950, SP:P29274, GB:U20231, PID:1117998, PID:177892, and PID:400452; identified by sequence similarity; putative.
 
    0.951
pyrB
Aspartate carbamoyltransferase, catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.802
PG_0362
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
PG_0363
Conserved domain protein.
       0.773
PG_0359
Flavin reductase domain protein; Identified by match to PFAM protein family HMM PF01613.
       0.591
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
       0.587
PG_0356
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.417
PG_0355
Hypothetical protein; Identified by Glimmer2; putative.
       0.411
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.