STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0661Hypothetical protein; Identified by Glimmer2; putative. (53 aa)    
Predicted Functional Partners:
PG_0659
Conserved hypothetical protein; Similar to GB:L29436, and PID:459904; identified by sequence similarity; putative.
       0.773
PG_0660
Nitroreductase family protein.
       0.773
PG_0658
Phosphatase, YrbI family; Identified by match to TIGR protein family HMM TIGR01681.
       0.737
maf
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.707
PG_0662
Hypothetical protein; Identified by Glimmer2; putative.
       0.557
rpmH
Ribosomal protein L34; Identified by match to PFAM protein family HMM PF00468; Belongs to the bacterial ribosomal protein bL34 family.
       0.544
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.