STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)    
Predicted Functional Partners:
pta
Phosphotransacetylase; Similar to GB:U00039, SP:P28242, GB:X67639, PID:43280, PID:466632, GB:U00096, and PID:1789909; identified by sequence similarity; putative.
 
 
 0.996
PG_1328
CoA ligase family protein; Similar to SP:P32673, GB:U00006, PID:396297, GB:U00096, and PID:1790387; identified by sequence similarity; putative.
    
 0.916
maeB
NADP-dependent malic enzyme; Similar to GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, SP:P08531, PID:40946, GB:U00096, PID:1736558, PID:1736563, and PID:1788210; identified by sequence similarity; putative.
  
  
 0.842
PG_0548
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
  
  
 0.754
fumB
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.576
PG_1173
YkgG family protein; Identified by match to PFAM protein family HMM PF02589.
  
  
 0.568
nhaA
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
      
 0.560
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.500
PG_0429
Pyruvate synthase.
  
  
 0.475
PG_0174
Pyridine nucleotide-disulphide oxidoreductase family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.450
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.