STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porRPigmentation and extracellular proteinase regulator; Belongs to the DegT/DnrJ/EryC1 family. (384 aa)    
Predicted Functional Partners:
PG_0002
Hexapeptide transferase family protein; Similar to GB:U03884, GB:U12541, GB:U12542, GB:U12544, GB:U12545, GB:S78737, GB:U12543, SP:P48048, PID:1698659, PID:1698660, PID:1698661, PID:1698662, PID:1698663, PID:1698664, PID:433143, PID:529313, PID:529315, PID:529317, PID:639911, and PID:639912; identified by sequence similarity; putative.
 
 0.990
PG_2119
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to PFAM protein family HMM PF02894.
  
 
 0.982
porS
porS protein; Identified by match to TIGR protein family HMM TIGR01695.
  
  
 0.911
PG_1135
Bacterial sugar transferase; Identified by match to PFAM protein family HMM PF02397.
 
  
 0.794
PG_1136
Conserved hypothetical protein; Similar to GP:18892817; identified by sequence similarity; putative.
  
    0.791
rfbB
dTDP-glucose 4,6-dehydratase; Similar to SP:P02345, GB:X04500, GB:M15330, GB:K02770, GB:M54933, GB:X02532, GB:X56087, GB:X52431, GB:M15840, SP:P01584, PID:186288, PID:307043, PID:307045, PID:312408, PID:33790, PID:35663, and PID:386816; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.734
epsC
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.684
PG_1903
Conserved hypothetical protein; Similar to GB:X58178, GB:U20101, GB:U20102, GB:U20103, GB:U20104, GB:X66816, and PID:47363; identified by sequence similarity; putative.
  
  
 0.607
PG_0664
Oxidoreductase, Gfo/Idh/MocA family; Glycosidase; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.
  
  
 0.598
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.568
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.