STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1178Hypothetical protein; Identified by Glimmer2; putative. (425 aa)    
Predicted Functional Partners:
PG_1179
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.978
PG_1180
Membrane protein, putative; Similar to SP:P19371; identified by sequence similarity; putative.
 
   
 0.942
PG_0999
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.631
PG_1176
ABC transporter, ATP-binding protein, putative.
 
     0.621
PG_1181
Transcriptional regulator, tetR family.
 
     0.596
PG_1175
ABC transporter, ATP-binding protein, putative.
 
     0.572
PG_0822
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.471
PG_1451
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.467
PG_1177
ISPg1, transposase.
  
    0.465
PG_1493
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.400
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.