STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1704Thiol:disulfide interchange protein dsbD, putative. (682 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.989
PG_1703
MazG family protein.
       0.787
PG_2042
Thioredoxin family protein.
 
 
 0.711
PG_2094
Conserved domain protein.
  
    0.646
PG_0649
Identified by match to PFAM protein family HMM PF03692.
  
     0.637
PG_0140
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.636
PG_2139
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.633
PG_0147
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.628
PG_2144
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.617
PG_0698
Lipoprotein, putative.
  
 
 0.614
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.