STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1888Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the sulfur carrier protein TusA family. (204 aa)    
Predicted Functional Partners:
PG_0174
Pyridine nucleotide-disulphide oxidoreductase family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.853
PG_1887
Rhodanese-like domain protein; Similar to GB:M35531, SP:P19526, PID:1648868, PID:2217921, PID:2217925, PID:2217927, PID:2217929, and PID:306830; identified by sequence similarity; putative.
 
   
 0.834
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.792
PG_1751
Aminotransferase, class V.
 
 
 
 0.734
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.552
PG_1889
Hypothetical protein; Identified by Glimmer2; putative.
       0.483
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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