Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pph1 | pknA | RB8362 | RB1532 | Probable protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09. | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | 0.802 |
RB1533 | RB1535 | RB1533 | RB1535 | Conserved hypothetical protein; PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06. | Hypothetical protein. | 0.870 |
RB1533 | pknA | RB1533 | RB1532 | Conserved hypothetical protein; PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06. | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | 0.773 |
RB1535 | RB1533 | RB1535 | RB1533 | Hypothetical protein. | Conserved hypothetical protein; PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06. | 0.870 |
RB1535 | pknA | RB1535 | RB1532 | Hypothetical protein. | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | 0.542 |
RB3245 | pknA | RB3245 | RB1532 | Protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09. | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | 0.799 |
pknA | Pph1 | RB1532 | RB8362 | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | Probable protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09. | 0.802 |
pknA | RB1533 | RB1532 | RB1533 | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | Conserved hypothetical protein; PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06. | 0.773 |
pknA | RB1535 | RB1532 | RB1535 | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | Hypothetical protein. | 0.542 |
pknA | RB3245 | RB1532 | RB3245 | PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE PUTATIVE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61. | Protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09. | 0.799 |