node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RB2640 | queE | RB2640 | RB2645 | Hypothetical protein-signal peptide prediction. | Conserved hypothetical protein-putative radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.553 |
RB2640 | queF | RB2640 | RB2642 | Hypothetical protein-signal peptide prediction. | Conserved hypothetical protein-putative GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.757 |
RB5135 | RB8806 | RB5135 | RB8806 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | 0.900 |
RB5135 | folE | RB5135 | RB11853 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | GTP cyclohydrolase I; PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110. | 0.972 |
RB5135 | guaA-2 | RB5135 | RB8374 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.429 |
RB5135 | queC | RB5135 | RB8329 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | Probable transcription regulator; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.938 |
RB5135 | queE | RB5135 | RB2645 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | Conserved hypothetical protein-putative radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.994 |
RB5135 | queF | RB5135 | RB2642 | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | Conserved hypothetical protein-putative GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.787 |
RB6226 | queC | RB6226 | RB8329 | PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026. | Probable transcription regulator; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.485 |
RB6226 | queE | RB6226 | RB2645 | PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026. | Conserved hypothetical protein-putative radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.463 |
RB6226 | queF | RB6226 | RB2642 | PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026. | Conserved hypothetical protein-putative GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.560 |
RB6226 | tgt | RB6226 | RB1970 | PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.513 |
RB8806 | RB5135 | RB8806 | RB5135 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | 0.900 |
RB8806 | folE | RB8806 | RB11853 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | GTP cyclohydrolase I; PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110. | 0.972 |
RB8806 | guaA-2 | RB8806 | RB8374 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.498 |
RB8806 | queC | RB8806 | RB8329 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | Probable transcription regulator; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.848 |
RB8806 | queE | RB8806 | RB2645 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | Conserved hypothetical protein-putative radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.983 |
RB8806 | queF | RB8806 | RB2642 | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | Conserved hypothetical protein-putative GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.727 |
folE | RB5135 | RB11853 | RB5135 | GTP cyclohydrolase I; PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110. | 6-pyruvoyl tetrahydrobiopterin synthase; Best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09. | 0.972 |
folE | RB8806 | RB11853 | RB8806 | GTP cyclohydrolase I; PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110. | Conserved hypothetical protein-putative 6-pyruvoyl-tetrahydropterin synthase; Best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87. | 0.972 |