STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB6678Hypothetical protein. (117 aa)    
Predicted Functional Partners:
RB6680
Conserved hypothetical protein; PMID: 10731132 best DB hits: BLAST: gb:AAF57913.1; (AE003804) CG9642 gene product [Drosophila; E=0.032.
       0.757
RB6677
Hypothetical protein.
       0.601
RB6681
Hypothetical protein.
       0.586
RB6671
Conserved hypothetical protein; PMID: 98151343 best DB hits: BLAST: gb:AAF55179.1; (AE003708) CG5038 gene product [Drosophila; E=4e-10 gb:AAF26789.1; AC016829_13 (AC016829) putative O-linked GlcNAc; E=4e-09 ddbj:BAB21885.1; (AB055261) hypothetical protein [Macaca; E=2e-08 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=4e-07 PFAM: PF00515; TPR Domain; E=1.6e-05.
       0.445
RB6676
Hypothetical protein.
       0.445
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.