node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RB1856 | hemA | RB1856 | RB9848 | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.830 |
RB1856 | hemC | RB1856 | RB6828 | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.997 |
RB1856 | hemD | RB1856 | RB7020 | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | PMID: 7665501 best DB hits: BLAST: gb:AAK00606.1; AF221100_3 (AF221100) uroporphyrinogen III; E=1e-89 swissprot:Q59294; HEM4_CLOJO PORPHYRIN BIOSYNTHESIS PROTEIN HEMD; E=1e-64 gb:AAC18588.1; (AF064061) uroporphyrinogen-III; E=3e-63 COG: NMB1156_2; COG0007 Uroporphyrinogen-III methylase; E=2e-44 sll0166_2; COG1587 Uroporphyrinogen-III synthase; E=7e-30 PFAM: PF00590; Tetrapyrrole (Corrin/Porphyrin); E=1.2e-63 PF02602; Uroporphyrinogen-III synthase H; E=7.1e-43. | 0.989 |
RB1856 | hemL | RB1856 | RB6831 | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | PMID: 7763385 PMID: 1672867 best DB hits: BLAST: pir:E81978; probable glutamate-1-semialdehyde 2,1-aminomutase (EC; E=1e-116 swissprot:Q40147; GSA_LYCES GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 swissprot:Q06741; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 COG: BS_hemL; COG0001 Glutamate-1-semialdehyde aminotransferase; E=1e-116 PFAM: PF00202; Aminotransferase class-III; E=1.8e-125. | 0.993 |
RB1856 | uroD | RB1856 | RB7803 | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.967 |
RB9844 | RB9849 | RB9844 | RB9849 | Hypothetical protein-putative transmembrane protein. | Best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04. | 0.741 |
RB9844 | comE | RB9844 | RB9840 | Hypothetical protein-putative transmembrane protein. | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | 0.738 |
RB9844 | hemA | RB9844 | RB9848 | Hypothetical protein-putative transmembrane protein. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.806 |
RB9849 | RB9844 | RB9849 | RB9844 | Best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04. | Hypothetical protein-putative transmembrane protein. | 0.741 |
RB9849 | comE | RB9849 | RB9840 | Best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04. | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | 0.632 |
RB9849 | hemA | RB9849 | RB9848 | Best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.741 |
comE | RB9844 | RB9840 | RB9844 | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | Hypothetical protein-putative transmembrane protein. | 0.738 |
comE | RB9849 | RB9840 | RB9849 | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | Best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04. | 0.632 |
comE | hemA | RB9840 | RB9848 | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.717 |
gltX | gluQ | RB7600 | RB13261 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | glutamyl-tRNA synthetase-related protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.927 |
gltX | hemA | RB7600 | RB9848 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.906 |
gluQ | gltX | RB13261 | RB7600 | glutamyl-tRNA synthetase-related protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.927 |
gluQ | hemA | RB13261 | RB9848 | glutamyl-tRNA synthetase-related protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.906 |
hemA | RB1856 | RB9848 | RB1856 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Delta-aminolevulinic acid dehydratase; PMID: 8226669 best DB hits: BLAST: ddbj:BAA35069.1; (AB015492) porphobilinogen synthase; E=1e-114 swissprot:P45622; HEM2_BRAJA DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-108 swissprot:Q59643; HEM2_PSEAE DELTA-AMINOLEVULINIC ACID DEHYDRATASE; E=1e-105 COG: PA5243; COG0113 Delta-aminolevulinic acid dehydratase; E=1e-106 PFAM: PF00490; Delta-aminolevulinic acid dehydratas; E=1.8e-183; Belongs to the ALAD family. | 0.830 |
hemA | RB9844 | RB9848 | RB9844 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Hypothetical protein-putative transmembrane protein. | 0.806 |