STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0114enoyl-CoA hydratase, putative; Similar to PID:1502424 GB:AL123456 percent identity: 55.46; identified by sequence similarity; putative. (257 aa)    
Predicted Functional Partners:
hbd
3-hydroxybutyryl-CoA dehydrogenase; Similar to SP:P45856 PID:881605 PID:1303932 GB:AL009126 percent identity: 69.78; identified by sequence similarity; putative; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
 0.975
DR_A0143
3-hydroxyacyl-CoA dehydrogenase, putative; Similar to SP:P41938 PID:559411 percent identity: 56.34; identified by sequence similarity; putative.
 
 0.912
DR_0113
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P32573 PID:1302205 PID:553143 PID:600063 percent identity: 62.84; identified by sequence similarity; putative.
  
 0.737
DR_1072
acetyl-CoA acetyltransferase; Similar to GB:L42023 SP:P44873 PID:1005748 PID:1220864 PID:1205019 percent identity: 73.03; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.692
DR_1428
acetyl-CoA acetyltransferase; Similar to GB:AL009126 percent identity: 64.03; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.692
DR_1960
acetyl-CoA acetyltransferase; Similar to GB:U08465 SP:P45359 PID:475715 percent identity: 73.47; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.692
DR_2480
acetyl-CoA acetyltransferase; Similar to GB:J04987 SP:P14611 PID:141954 percent identity: 69.74; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.692
DR_A0053
acetyl-CoA acetyltransferase; Similar to GB:U00096 PID:1742272 PID:1742278 PID:1787663 percent identity: 73.13; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.692
DR_1544
acyl-CoA dehydrogenase; Similar to PID:1055219 SP:P52042 percent identity: 67.20; identified by sequence similarity; putative.
 
 0.576
DR_1255
acyl-CoA dehydrogenase; Similar to SP:P45867 PID:853760 GB:AL009126 percent identity: 69.19; identified by sequence similarity; putative.
 
 0.568
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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