STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0866Lipopolysaccharide biosynthesis protein-related protein; Similar to GP:2911108 percent identity: 53.42; identified by sequence similarity; putative. (364 aa)    
Predicted Functional Partners:
folD
Methylenetetrahydrofolate dehydrogenase/methenylenetetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
 
   
 0.804
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Similar to GB:J02732 SP:P12048 PID:143373 GB:AL009126 percent identity: 66.73; identified by sequence similarity; putative.
   
   0.791
DR_A0034
UDP-galactose-lipid carrier transferase; Similar to PID:600427 SP:Q46628 percent identity: 60.11; identified by sequence similarity; putative.
 
  
 0.756
DR_1225
Mannosyltransferase, putative; Similar to GP:2108334 percent identity: 54.87; identified by sequence similarity; putative.
  
     0.686
treZ
Maltooligosyltrehalose trehalohydrolase, putative; Similar to PID:1040697 percent identity: 56.74; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
   
 0.592
glgB
1,4-alpha-glucan branching enzyme, putative; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.592
DR_0869
Hypothetical protein; Identified by Glimmer2; putative.
       0.540
DR_A0041
Thymidine diphosphoglucose 4,6-dehydratase; Similar to PID:567874 percent identity: 70.54; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.511
DR_1064
Hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.496
DR_A0043
Lipopolysaccharide biosynthesis protein, putative; Similar to GB:L33181 GB:S72887 PID:609644 percent identity: 54.68; identified by sequence similarity; putative.
  
  
 0.489
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.