STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1206Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (195 aa)    
Predicted Functional Partners:
DR_0704
Hypothetical protein; Identified by Glimmer2; putative.
 
      0.855
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.843
DR_2440
nifR3 protein; Similar to GB:X71436 PID:581522 percent identity: 57.30; identified by sequence similarity; putative.
 
     0.598
ftsE
ftsE protein; Part of the ABC transporter FtsEX involved in cellular division.
     
 0.533
DR_1204
4-carboxymuconolactone decarboxylase; Similar to GB:L05770 SP:P20370 GB:M33798 PID:141772 PID:141781 percent identity: 66.39; identified by sequence similarity; putative.
       0.530
DR_1701
2-hydroxyacid dehydrogenase, putative; Similar to SP:P45637 PID:599720 PID:950197 percent identity: 50.56; identified by sequence similarity; putative.
  
   0.530
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.504
DR_0846
Bacterioferritin comigratory protein; Similar to GB:AE000657 percent identity: 65.61; identified by sequence similarity; putative.
       0.493
kynA
Tryptophan 2,3-dioxygenase, putative; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
    
   0.454
DR_1203
LmbE-related protein; Similar to PID:699274 percent identity: 56.06; identified by sequence similarity; putative.
       0.410
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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