STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1240Citrate lyase, beta subunit; May play a role in fatty acid biosynthesis. (284 aa)    
Predicted Functional Partners:
DR_2206
Citrate lyase, beta subunit; Similar to GB:U00096 SP:P77770 PID:1778533 PID:1786833 percent identity: 55.97; identified by sequence similarity; putative; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.920
DR_1239
MaoC-related protein; Similar to GB:AL123456 percent identity: 74.32; identified by sequence similarity; putative.
 
  
 0.895
DR_1241
Hypothetical protein; Identified by Glimmer2; putative.
       0.553
DR_1238
Homocitrate synthase; Similar to GP:3724367 percent identity: 80.90; identified by sequence similarity; putative; Belongs to the alpha-IPM synthase/homocitrate synthase family.
     
 0.502
DR_1084
methylmalonyl-CoA mutase, beta subunit; Similar to GB:L30136 PID:463175 percent identity: 82.08; identified by sequence similarity; putative.
  
  
 0.425
DR_0420
ATP-dependent helicase; Similar to SP:P37024 PID:473807 PID:473806 GB:U00096 PID:1488196 percent identity: 62.89; identified by sequence similarity; putative.
 
      0.414
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.