STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1243Serine/threonine protein kinase, putative; Similar to PID:625077 percent identity: 55.30; identified by sequence similarity; putative. (278 aa)    
Predicted Functional Partners:
DR_2513
Conserved hypothetical protein; Similar to PID:1652752 percent identity: 60.48; identified by sequence similarity; putative.
 
 0.900
DR_A0334
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 51.69; identified by sequence similarity; putative.
 
 
 0.857
DR_1244
Conserved hypothetical protein; Similar to SP:P54459 PID:1303799 GB:AL009126 percent identity: 46.26; identified by sequence similarity; putative.
       0.843
DR_0534
Serine/threonine protein kinase-related protein; Similar to PID:666024 SP:P54739 percent identity: 46.38; identified by sequence similarity; putative.
  
     0.775
DR_1242
Hypothetical protein; Identified by Glimmer2; putative.
       0.692
DR_A0333
FraH-related protein; Similar to SP:P46017 PID:556608 percent identity: 49.49; identified by sequence similarity; putative.
   
 
 0.503
DR_0350
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 41.33; identified by sequence similarity; putative.
 
 
 0.423
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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