STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1331Hypothetical protein; Identified by Glimmer2; putative. (81 aa)    
Predicted Functional Partners:
DR_1332
Hypothetical protein; Identified by Glimmer2; putative.
       0.675
DR_1330
Antibiotic biosynthesis protein, putative; Similar to SP:P37757 GB:U00096 PID:1787737 percent identity: 51.39; identified by sequence similarity; putative; Belongs to the PhzF family.
       0.620
DR_1329
Conserved hypothetical protein; Similar to SP:P54947 PID:1408493 GB:AL009126 percent identity: 47.33; identified by sequence similarity; putative.
       0.582
DR_1333
Glycosyl hyrolase, family 3; Similar to PID:1750216 percent identity: 57.87; identified by sequence similarity; putative.
       0.507
DR_1328
Conserved hypothetical protein; Similar to PID:1651948 percent identity: 69.01; identified by sequence similarity; putative.
       0.455
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.