STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgkPhosphoglycerate kinase; Similar to SP:P09403 GB:X12464 PID:48249 percent identity: 76.94; identified by sequence similarity; putative; Belongs to the phosphoglycerate kinase family. (411 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P).
 
 0.999
DR_1343
Glyceraldehyde 3-phosphate dehydrogenase; Similar to SP:P00361 GB:X16595 PID:48121 percent identity: 81.52; identified by sequence similarity; putative; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.999
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
 
 0.996
pgi
Glucose-6-phosphate isomerase; Similar to GP:3334790 percent identity: 79.44; identified by sequence similarity; putative.
  
 
 0.985
DR_1589
Fructose-bisphosphate aldolase; Similar to GB:AE000511 SP:P56109 PID:2313265 percent identity: 66.67; identified by sequence similarity; putative.
  
 
 0.922
apgM
Phosphonopyruvate decarboxylase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.916
DR_0602
Phosphoglycerate mutase-related protein; Similar to GB:AE000657 percent identity: 50.67; identified by sequence similarity; putative.
  
 
 0.906
DR_2564
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.906
DR_2635
Pyruvate kinase; Similar to PID:598097 SP:Q46078 percent identity: 63.38; identified by sequence similarity; putative; Belongs to the pyruvate kinase family.
 
 
 0.901
DR_0122
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.849
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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