STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_17012-hydroxyacid dehydrogenase, putative; Similar to SP:P45637 PID:599720 PID:950197 percent identity: 50.56; identified by sequence similarity; putative. (311 aa)    
Predicted Functional Partners:
DR_1700
Daunorubicin C-13 ketoreductase; Similar to GP:3778997 percent identity: 58.46; identified by sequence similarity; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.827
DR_1702
Kanamycin resistance protein-related protein; Similar to SP:P14510 percent identity: 51.43; identified by sequence similarity; putative.
       0.788
DR_1703
Inositol monophosphatase family protein; Similar to GB:AL009126 percent identity: 49.79; identified by sequence similarity; putative.
 
  
 0.750
udk
Uridine kinase; Similar to GB:AL009126 percent identity: 70.73; identified by sequence similarity; putative.
   
  0.639
DR_0833
Histone deacetylase/AcuC/AphA family protein; Similar to SP:P28606 PID:580726 PID:669044 PID:669045 percent identity: 59.38; identified by sequence similarity; putative.
 
 
 0.599
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  
 0.563
DR_1206
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
   0.530
DR_1278
Homoserine dehydrogenase; Similar to SP:P08499 GB:Y00476 PID:297383 PID:40503 percent identity: 56.69; identified by sequence similarity; putative.
 
 
 0.512
DR_1699
Hypothetical protein; Identified by Glimmer2; putative.
       0.509
DR_0928
Endonuclease III, putative; Similar to GB:Pyro_h percent identity: 51.34; identified by sequence similarity; putative.
       0.504
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.