STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rqkASerine/threonine protein kinase, putative; Plays an important role in radiation resistance and DNA double-strand break (DSB) repair. Involved in transcriptional regulation of genes important for bacterial stress response. Phosphorylates PprA in vitro. (668 aa)    
Predicted Functional Partners:
DR_2513
Conserved hypothetical protein; Similar to PID:1652752 percent identity: 60.48; identified by sequence similarity; putative.
 
 0.879
DR_A0334
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 51.69; identified by sequence similarity; putative.
 
 
 0.860
DR_0379
Outer membrane protein; Similar to PID:2231197 percent identity: 45.54; identified by sequence similarity; putative.
  
 
 0.677
DR_2517
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.554
DR_0071
Peptidyl-prolyl cis-trans isomerse, putative, PpiC family; Similar to GB:U00096 SP:P77241 PID:1580712 PID:1773125 PID:1786645 percent identity: 48.44; identified by sequence similarity; putative.
  
 
 0.527
DR_A0333
FraH-related protein; Similar to SP:P46017 PID:556608 percent identity: 49.49; identified by sequence similarity; putative.
   
 
 0.527
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity). Probably involved in base excision repair ; Belongs to the RecA family.
   
 
 0.523
DR_0350
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 41.33; identified by sequence similarity; putative.
 
 
 0.510
DR_2278
Amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to SP:P10344 PID:41569 GB:U00096 PID:1651365 PID:1651371 percent identity: 53.85; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.506
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.484
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.