STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssdASuccinic-semialdehyde dehydrogenase, putative; Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate. (477 aa)    
Predicted Functional Partners:
argD
4-aminobutyrate aminotransferase; Similar to GB:Pyro_h percent identity: 65.65; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 0.934
SdhA
Succinate dehydrogenase, flavoprotein subunit; Similar to GB:AL123456 percent identity: 72.31; identified by sequence similarity; putative.
  
 0.932
DR_0814
Proline dehydrogenase, putative; Converts proline to delta-1-pyrroline-5-carboxylate.
 
 
 0.927
SdhB
Succinate dehydrogenase, iron-sulfur subunit; Similar to GB:U00022 PID:467181 percent identity: 72.62; identified by sequence similarity; putative.
   
 
 0.915
DR_A0003
Succinate-semialdehyde dehydrogenase; Similar to GB:M88334 SP:P25526 PID:147901 GB:U00096 PID:1789015 percent identity: 69.60; identified by sequence similarity; putative.
  
  
 
0.915
DR_A0291
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Similar to PID:633197 PID:757831 percent identity: 80.00; identified by sequence similarity; putative; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.912
DR_0954
Succinate dehydrogenase, cytochrome subunit; Similar to GB:AL123456 percent identity: 56.60; identified by sequence similarity; putative.
   
 
  0.906
DR_0953
Succinate dehydrogenase, hydrophobic subunit SdhD, putative; Similar to GB:AL123456 percent identity: 58.04; identified by sequence similarity; putative.
   
 
 0.905
gltA
Citrate synthase; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect (By similarity).
  
 0.873
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
 
 0.870
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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