Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU1113 | GSU1114 | GSU1113 | GSU1114 | Adenosine kinase. | TPR domain lipoprotein. | 0.622 |
GSU1113 | GSU1115 | GSU1113 | GSU1115 | Adenosine kinase. | Helix-turn-helix domain protein. | 0.519 |
GSU1113 | apt | GSU1113 | GSU1526 | Adenosine kinase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.657 |
GSU1113 | guaA | GSU1113 | GSU2194 | Adenosine kinase. | Guanosine-5'-monophosphate synthase; Catalyzes the synthesis of GMP from XMP. | 0.461 |
GSU1113 | mtaP | GSU1113 | GSU1112 | Adenosine kinase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.844 |
GSU1113 | ndk | GSU1113 | GSU1110 | Adenosine kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.665 |
GSU1113 | rlmN | GSU1113 | GSU1111 | Adenosine kinase. | 23S rRNA (2-methyl-A2503)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.806 |
GSU1114 | GSU1113 | GSU1114 | GSU1113 | TPR domain lipoprotein. | Adenosine kinase. | 0.622 |
GSU1114 | GSU1115 | GSU1114 | GSU1115 | TPR domain lipoprotein. | Helix-turn-helix domain protein. | 0.864 |
GSU1114 | mtaP | GSU1114 | GSU1112 | TPR domain lipoprotein. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.592 |
GSU1114 | ndk | GSU1114 | GSU1110 | TPR domain lipoprotein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.468 |
GSU1114 | rlmN | GSU1114 | GSU1111 | TPR domain lipoprotein. | 23S rRNA (2-methyl-A2503)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.619 |
GSU1115 | GSU1113 | GSU1115 | GSU1113 | Helix-turn-helix domain protein. | Adenosine kinase. | 0.519 |
GSU1115 | GSU1114 | GSU1115 | GSU1114 | Helix-turn-helix domain protein. | TPR domain lipoprotein. | 0.864 |
GSU1115 | mtaP | GSU1115 | GSU1112 | Helix-turn-helix domain protein. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.520 |
GSU1115 | ndk | GSU1115 | GSU1110 | Helix-turn-helix domain protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.419 |
GSU1115 | rlmN | GSU1115 | GSU1111 | Helix-turn-helix domain protein. | 23S rRNA (2-methyl-A2503)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.521 |
GSU1897 | mtaP | GSU1897 | GSU1112 | Nucleoside phosphorylase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.914 |
GSU1897 | speE | GSU1897 | GSU2502 | Nucleoside phosphorylase. | Spermine/spermidine synthase-related protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.902 |
apt | GSU1113 | GSU1526 | GSU1113 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Adenosine kinase. | 0.657 |
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