STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1437Peptidase lipoprotein, M48 family. (264 aa)    
Predicted Functional Partners:
GSU1438
ATPase DUF815, putative.
  
    0.788
GSU0205
Transcriptional regulator, TetR family.
      
 0.758
GSU1432
TPR domain protein.
 
  
 0.734
GSU1436
Hypothetical protein.
  
    0.730
GSU1433
Peptide ABC transporter, periplasmic peptide-binding lipoprotein.
  
    0.724
GSU2741
Transcriptional regulator, TetR family.
      
 0.687
GSU1434
Peptide ABC transporter, membrane protein.
  
    0.668
GSU1435
Peptide ABC transporter, membrane protein.
  
    0.644
GSU1971
Hypothetical protein.
   
 
 0.616
GSU1773
Zinc metalloendopeptidase M23 domain protein.
 
 
 
 0.606
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.