Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU3278 | cheW34H-1 | GSU3278 | GSU1142 | Pentapeptide repeat protein. | Scaffold protein CheW associated with MCPs of class 34H. | 0.764 |
GSU3278 | cheW34H-2 | GSU3278 | GSU1299 | Pentapeptide repeat protein. | Scaffold protein CheW associated with MCPs of class 34H. | 0.764 |
GSU3278 | cheW34H-3 | GSU3278 | GSU1301 | Pentapeptide repeat protein. | Scaffold protein CheW associated with MCPs of class 34H. | 0.764 |
GSU3278 | cheW34H-4 | GSU3278 | GSU0684 | Pentapeptide repeat protein. | Scaffold protein CheW associated with MCPs of class 34H. | 0.764 |
GSU3278 | mvhF | GSU3278 | GSU2420 | Pentapeptide repeat protein. | Methyl viologen-reducing hydrogenase-associated ferredoxin. | 0.443 |
GSU3278 | mvhQ | GSU3278 | GSU2416 | Pentapeptide repeat protein. | Scaffold protein CheW associated with MCPs of classes 40H and 40+24H. | 0.764 |
GSU3278 | mvhV | GSU3278 | GSU2423 | Pentapeptide repeat protein. | Methyl-accepting chemotaxis sensory transducer. | 0.783 |
cheA34H | cheW34H-1 | GSU1290 | GSU1142 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Scaffold protein CheW associated with MCPs of class 34H. | 0.987 |
cheA34H | cheW34H-2 | GSU1290 | GSU1299 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Scaffold protein CheW associated with MCPs of class 34H. | 0.987 |
cheA34H | cheW34H-3 | GSU1290 | GSU1301 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Scaffold protein CheW associated with MCPs of class 34H. | 0.987 |
cheA34H | cheW34H-4 | GSU1290 | GSU0684 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Scaffold protein CheW associated with MCPs of class 34H. | 0.987 |
cheA34H | mvhQ | GSU1290 | GSU2416 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Scaffold protein CheW associated with MCPs of classes 40H and 40+24H. | 0.986 |
cheA34H | mvhV | GSU1290 | GSU2423 | Sensor histidine kinase CheA associated with MCPs of class 34H. | Methyl-accepting chemotaxis sensory transducer. | 0.832 |
cheW34H-1 | GSU3278 | GSU1142 | GSU3278 | Scaffold protein CheW associated with MCPs of class 34H. | Pentapeptide repeat protein. | 0.764 |
cheW34H-1 | cheA34H | GSU1142 | GSU1290 | Scaffold protein CheW associated with MCPs of class 34H. | Sensor histidine kinase CheA associated with MCPs of class 34H. | 0.987 |
cheW34H-1 | mvhV | GSU1142 | GSU2423 | Scaffold protein CheW associated with MCPs of class 34H. | Methyl-accepting chemotaxis sensory transducer. | 0.807 |
cheW34H-2 | GSU3278 | GSU1299 | GSU3278 | Scaffold protein CheW associated with MCPs of class 34H. | Pentapeptide repeat protein. | 0.764 |
cheW34H-2 | cheA34H | GSU1299 | GSU1290 | Scaffold protein CheW associated with MCPs of class 34H. | Sensor histidine kinase CheA associated with MCPs of class 34H. | 0.987 |
cheW34H-2 | mvhV | GSU1299 | GSU2423 | Scaffold protein CheW associated with MCPs of class 34H. | Methyl-accepting chemotaxis sensory transducer. | 0.795 |
cheW34H-3 | GSU3278 | GSU1301 | GSU3278 | Scaffold protein CheW associated with MCPs of class 34H. | Pentapeptide repeat protein. | 0.764 |
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