Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU0647 | pyrG | GSU0647 | GSU1895 | Protein of unknown function DUF2168. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.584 |
GSU0647 | trmFO | GSU0647 | GSU2547 | Protein of unknown function DUF2168. | tRNA (5-methyl-U54)-methylenetransferase/reductase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.548 |
GSU0647 | uppS | GSU0647 | GSU1917 | Protein of unknown function DUF2168. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.578 |
GSU2546 | GSU2548 | GSU2546 | GSU2548 | Hypothetical protein. | Hypothetical protein. | 0.562 |
GSU2546 | dprA | GSU2546 | GSU2550 | Hypothetical protein. | DNA protection single-strand-binding protein DprA. | 0.411 |
GSU2546 | maf | GSU2546 | GSU2545 | Hypothetical protein. | Nucleotide/nucleic acid-binding septum formation-inhibiting protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.787 |
GSU2546 | topA | GSU2546 | GSU2549 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.423 |
GSU2546 | trmFO | GSU2546 | GSU2547 | Hypothetical protein. | tRNA (5-methyl-U54)-methylenetransferase/reductase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.561 |
GSU2546 | yggS | GSU2546 | GSU2544 | Hypothetical protein. | Pyridoxal-5'-phosphate-dependent enzyme, class III; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.793 |
GSU2548 | GSU2546 | GSU2548 | GSU2546 | Hypothetical protein. | Hypothetical protein. | 0.562 |
GSU2548 | dprA | GSU2548 | GSU2550 | Hypothetical protein. | DNA protection single-strand-binding protein DprA. | 0.552 |
GSU2548 | maf | GSU2548 | GSU2545 | Hypothetical protein. | Nucleotide/nucleic acid-binding septum formation-inhibiting protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.564 |
GSU2548 | topA | GSU2548 | GSU2549 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.575 |
GSU2548 | trmFO | GSU2548 | GSU2547 | Hypothetical protein. | tRNA (5-methyl-U54)-methylenetransferase/reductase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.773 |
GSU2548 | yggS | GSU2548 | GSU2544 | Hypothetical protein. | Pyridoxal-5'-phosphate-dependent enzyme, class III; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.560 |
dprA | GSU2546 | GSU2550 | GSU2546 | DNA protection single-strand-binding protein DprA. | Hypothetical protein. | 0.411 |
dprA | GSU2548 | GSU2550 | GSU2548 | DNA protection single-strand-binding protein DprA. | Hypothetical protein. | 0.552 |
dprA | maf | GSU2550 | GSU2545 | DNA protection single-strand-binding protein DprA. | Nucleotide/nucleic acid-binding septum formation-inhibiting protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.450 |
dprA | topA | GSU2550 | GSU2549 | DNA protection single-strand-binding protein DprA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.903 |
dprA | trmFO | GSU2550 | GSU2547 | DNA protection single-strand-binding protein DprA. | tRNA (5-methyl-U54)-methylenetransferase/reductase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.639 |
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