Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MJ_0540 | MJ_0541 | MJ_0540 | MJ_0541 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | 0.940 |
MJ_0540 | lysS | MJ_0540 | MJ_0539 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | tRNA synthetase, putative; Similar to GB:D26185 SP:P22250 GB:L14580 GB:M55073 PID:143006 percent identity: 35.54; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.436 |
MJ_0540 | ppsA | MJ_0540 | MJ_0542 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. | 0.522 |
MJ_0541 | MJ_0540 | MJ_0541 | MJ_0540 | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | 0.940 |
MJ_0541 | lysS | MJ_0541 | MJ_0539 | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | tRNA synthetase, putative; Similar to GB:D26185 SP:P22250 GB:L14580 GB:M55073 PID:143006 percent identity: 35.54; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.412 |
MJ_0541 | ppsA | MJ_0541 | MJ_0542 | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. | 0.639 |
lysS | MJ_0540 | MJ_0539 | MJ_0540 | tRNA synthetase, putative; Similar to GB:D26185 SP:P22250 GB:L14580 GB:M55073 PID:143006 percent identity: 35.54; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | 0.436 |
lysS | MJ_0541 | MJ_0539 | MJ_0541 | tRNA synthetase, putative; Similar to GB:D26185 SP:P22250 GB:L14580 GB:M55073 PID:143006 percent identity: 35.54; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family. | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | 0.412 |
ppsA | MJ_0540 | MJ_0542 | MJ_0540 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0540. | 0.522 |
ppsA | MJ_0541 | MJ_0542 | MJ_0541 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. | Conserved hypothetical protein; Similar to GP:1001812 percent identity: 32.62; identified by sequence similarity; putative; Belongs to the archaeal NMN adenylyltransferase family. | 0.639 |