STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1158Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1158. (129 aa)    
Predicted Functional Partners:
MJ_1156
Cell division control protein 48 (cdc48), AAA family; Similar to GB:X79560 SP:P46464 PID:517390 percent identity: 57.53; identified by sequence similarity; putative; Belongs to the AAA ATPase family. CDC48 subfamily.
  
    0.816
MJ_0531
Conserved hypothetical protein; Similar to SP:P42297 PID:603780 PID:849027 GB:AL009126 percent identity: 37.76; identified by sequence similarity; putative; Belongs to the universal stress protein A family.
   
    0.805
MJ_1157
Conserved hypothetical protein; Similar to GP:1655726 percent identity: 32.52; identified by sequence similarity; putative; Belongs to the TtcA family.
       0.581
MJ_0577
Conserved hypothetical protein; Similar to SP:P42297 PID:603780 PID:849027 GB:AL009126 percent identity: 31.54; identified by sequence similarity; putative.
   
    0.532
MJ_1404
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1404.
   
    0.525
rpa
Replication factor A related protein; Probably plays an essential for replication of the chromosome, DNA recombination and repair (By similarity). Binds approximately 20 nucleotides.
       0.500
MJ_1232
Conserved hypothetical protein; Similar to GP:1707784 percent identity: 37.93; identified by sequence similarity; putative.
   
    0.463
MJ_0263
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 34.57; identified by sequence similarity; putative.
   
    0.457
MJ_0940
Transformation sensitive protein; Similar to GB:M86752 SP:P31948 PID:184565 percent identity: 30.84; identified by sequence similarity; putative.
   
    0.457
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.