Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACF07400.1 | ACF07449.1 | MARTH_orf613 | MARTH_orf683 | 5'-3' exonuclease, exo domain of DNA polymerase I. | Conserved hypothetical protein. | 0.551 |
| ACF07400.1 | deoB | MARTH_orf613 | MARTH_orf033 | 5'-3' exonuclease, exo domain of DNA polymerase I. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.504 |
| ACF07400.1 | efp | MARTH_orf613 | MARTH_orf281 | 5'-3' exonuclease, exo domain of DNA polymerase I. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.458 |
| ACF07400.1 | gidB1 | MARTH_orf613 | MARTH_orf113 | 5'-3' exonuclease, exo domain of DNA polymerase I. | Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.548 |
| ACF07400.1 | prsA | MARTH_orf613 | MARTH_orf112 | 5'-3' exonuclease, exo domain of DNA polymerase I. | Phosphoribosylpyrophosphate synthetase. | 0.776 |
| ACF07449.1 | ACF07400.1 | MARTH_orf683 | MARTH_orf613 | Conserved hypothetical protein. | 5'-3' exonuclease, exo domain of DNA polymerase I. | 0.551 |
| ACF07449.1 | deoB | MARTH_orf683 | MARTH_orf033 | Conserved hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.912 |
| ACF07449.1 | prsA | MARTH_orf683 | MARTH_orf112 | Conserved hypothetical protein. | Phosphoribosylpyrophosphate synthetase. | 0.941 |
| ACF07449.1 | rpiB | MARTH_orf683 | MARTH_orf654 | Conserved hypothetical protein. | Ribose-5-phosphate isomerase B. | 0.911 |
| ACF07449.1 | tktA | MARTH_orf683 | MARTH_orf277 | Conserved hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.933 |
| ACF07477.1 | prsA | MARTH_orf716 | MARTH_orf112 | Phosphoprotein serine/threonine phosphatase. | Phosphoribosylpyrophosphate synthetase. | 0.977 |
| deoB | ACF07400.1 | MARTH_orf033 | MARTH_orf613 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 5'-3' exonuclease, exo domain of DNA polymerase I. | 0.504 |
| deoB | ACF07449.1 | MARTH_orf033 | MARTH_orf683 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Conserved hypothetical protein. | 0.912 |
| deoB | prsA | MARTH_orf033 | MARTH_orf112 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Phosphoribosylpyrophosphate synthetase. | 0.911 |
| deoB | rpiB | MARTH_orf033 | MARTH_orf654 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribose-5-phosphate isomerase B. | 0.929 |
| deoB | tktA | MARTH_orf033 | MARTH_orf277 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Transketolase; Belongs to the transketolase family. | 0.913 |
| efp | ACF07400.1 | MARTH_orf281 | MARTH_orf613 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 5'-3' exonuclease, exo domain of DNA polymerase I. | 0.458 |
| efp | prsA | MARTH_orf281 | MARTH_orf112 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Phosphoribosylpyrophosphate synthetase. | 0.790 |
| efp | tig | MARTH_orf281 | MARTH_orf857 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Trigger factor (prolyl isomerase); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.847 |
| efp | tktA | MARTH_orf281 | MARTH_orf277 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Transketolase; Belongs to the transketolase family. | 0.849 |
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