STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MG_117Conserved hypothetical protein; MG117 has some similarity to the superoxide dismutase (Mn/Fe family), C-terminal domain; identified by similarity to EGAD:57238. (214 aa)    
Predicted Functional Partners:
MG_116
Conserved hypothetical protein; Identified by similarity to EGAD:57240.
       0.774
galE
UDP-glucose 4-epimerase; Involved in the metabolism of galactose. Catalyzes the conversion of UDP-galactose (UDP-Gal) to UDP-glucose (UDP-Glc) through a mechanism involving the transient reduction of NAD (By similarity).
       0.774
MG_115
Competence/damage-inducible protein CinA domain protein; Identified by similarity to EGAD:31034; match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
       0.768
MG_119
ABC transporter, ATP-binding protein; Part of the ABC transporter complex involved in carbohydrates import. Probably responsible for energy coupling to the transport system (By similarity).
       0.737
MG_120
This is part of an ABC transporter cassette. The permeases (MG120 and MG121) are similar to branched chain amino acid transporters; however the ATP-binding protein is much more similar to a galactoside transporter. MG120 has 9 transmembrane regions; identified by similarity to EGAD:57232; match to protein family HMM PF02653.
       0.737
MG_121
This is part of an ABC transporter cassette. The permeases (MG120 and MG121) are similar to branched chain amino acid transporters; however the ATP-binding protein is much more similar to a galactoside transporter. MG121 has 8 transmembrane regions; identified by similarity to EGAD:57230; match to protein family HMM PF02653.
       0.737
asnS
asparaginyl-tRNA synthetase; Identified by similarity to EGAD:57244; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457.
       0.688
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.688
pgi
Glucose-6-phosphate isomerase; MG111 has 1 transmembrane region; identified by similarity to SP:P81181; match to protein family HMM PF00342.
       0.661
rpe
Ribulose-phosphate 3-epimerase; Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate; Belongs to the ribulose-phosphate 3-epimerase family.
       0.661
Your Current Organism:
Mycoplasma genitalium
NCBI taxonomy Id: 243273
Other names: M. genitalium G37, Mycoplasma genitalium ATCC 33530, Mycoplasma genitalium G37, Mycoplasma genitalium str. G37, Mycoplasma genitalium strain G37
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