STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA2Metal ion ABC transporter ATP-binding protein, putative; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (304 aa)    
Predicted Functional Partners:
MG_181
Metal ion ABC transporter, permease protein; MG181 in part of a likely ABC trasporter cassette comprised of ATPases MG179 and MG180, plus this permaease. There is no likely substrate binding protein in the vicinity. These genes are similar to cobalt and amino acid transporters; identified by similarity to EGAD:36932; match to protein family HMM PF02361.
 0.999
MG_302
Metal ion ABC transporter, permease protein, putative; MG302 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins.MG302 has 6 transmembrane regions; identified by similarity to EGAD:56904; match to protein family HMM PF02361.
 
 0.990
ecfA1
Metal ion ABC transporter, ATP-binding protein, putative; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
0.977
oppF
Oligopeptide ABC transporter, ATP-binding protein; Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
  
0.944
MG_303
Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005.
  
  
0.936
oppD
Oligopeptide ABC transporter, ATP-binding protein; Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
     
0.900
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.871
MG_304
Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005.
  
  
0.857
rplQ
Ribosomal protein L17; Identified by similarity to EGAD:41362; match to protein family HMM PF01196; match to protein family HMM TIGR00059.
  
    0.804
pepF
Identified by similarity to SP:Q53778; match to protein family HMM PF01432; match to protein family HMM TIGR00181.
  
    0.790
Your Current Organism:
Mycoplasma genitalium
NCBI taxonomy Id: 243273
Other names: M. genitalium G37, Mycoplasma genitalium ATCC 33530, Mycoplasma genitalium G37, Mycoplasma genitalium str. G37, Mycoplasma genitalium strain G37
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