Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MG_252 | MG_287 | MG_252 | MG_287 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.974 |
| MG_252 | engB | MG_252 | MG_335 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | GTP-binding protein engB, putative; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.924 |
| MG_252 | mnmE | MG_252 | MG_008 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.932 |
| MG_252 | rbgA | MG_252 | MG_442 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | GTP-binding conserved hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity. Binds to the 23S rRNA (By similarity). Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.944 |
| MG_252 | rplC | MG_252 | MG_151 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.951 |
| MG_252 | rplK | MG_252 | MG_081 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.964 |
| MG_252 | rplN | MG_252 | MG_161 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.870 |
| MG_252 | rplQ | MG_252 | MG_178 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L17; Identified by similarity to EGAD:41362; match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.977 |
| MG_252 | rplU | MG_252 | MG_232 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.976 |
| MG_252 | rplX | MG_252 | MG_162 | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.954 |
| MG_287 | MG_252 | MG_287 | MG_252 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | RNA methyltransferase, TrmH family, group 3; Identified by similarity to EGAD:57207; match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.974 |
| MG_287 | engB | MG_287 | MG_335 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | GTP-binding protein engB, putative; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.935 |
| MG_287 | mnmE | MG_287 | MG_008 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.930 |
| MG_287 | rbgA | MG_287 | MG_442 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | GTP-binding conserved hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity. Binds to the 23S rRNA (By similarity). Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.974 |
| MG_287 | rplC | MG_287 | MG_151 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.981 |
| MG_287 | rplK | MG_287 | MG_081 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.982 |
| MG_287 | rplN | MG_287 | MG_161 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.909 |
| MG_287 | rplQ | MG_287 | MG_178 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L17; Identified by similarity to EGAD:41362; match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.996 |
| MG_287 | rplU | MG_287 | MG_232 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
| MG_287 | rplX | MG_287 | MG_162 | Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.983 |
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