Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TDE_0176 | TDE_0177 | TDE_0176 | TDE_0177 | Membrane protein, putative. | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | 0.990 |
TDE_0176 | TDE_0178 | TDE_0176 | TDE_0178 | Membrane protein, putative. | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | 0.570 |
TDE_0176 | pcp | TDE_0176 | TDE_0175 | Membrane protein, putative. | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | 0.941 |
TDE_0177 | TDE_0176 | TDE_0177 | TDE_0176 | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | Membrane protein, putative. | 0.990 |
TDE_0177 | TDE_0178 | TDE_0177 | TDE_0178 | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | 0.570 |
TDE_0177 | pcp | TDE_0177 | TDE_0175 | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | 0.938 |
TDE_0178 | TDE_0176 | TDE_0178 | TDE_0176 | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | Membrane protein, putative. | 0.570 |
TDE_0178 | TDE_0177 | TDE_0178 | TDE_0177 | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | 0.570 |
TDE_0178 | pcp | TDE_0178 | TDE_0175 | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | 0.542 |
pcp | TDE_0176 | TDE_0175 | TDE_0176 | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | Membrane protein, putative. | 0.941 |
pcp | TDE_0177 | TDE_0175 | TDE_0177 | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1496. | 0.938 |
pcp | TDE_0178 | TDE_0175 | TDE_0178 | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. | 0.542 |