STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDE_0411Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. (694 aa)    
Predicted Functional Partners:
TDE_1986
Adenylate cyclase, putative; Identified by similarity to SP:P43524; match to protein family HMM PF00211; match to protein family HMM PF00672.
 
  
0.936
TDE_0932
Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226; match to protein family HMM TIGR01612.
 
  
0.932
pyk
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
   
  0.901
nrdD
Anaerobic ribonucleoside-triphosphate reductase; Identified by similarity to GP:4127320; match to protein family HMM PF03477.
     
  0.900
TDE_0409
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.894
TDE_0410
Peptidase, M48 family; Identified by match to protein family HMM PF01435.
 
     0.826
TDE_1541
Identified by match to protein family HMM PF00753.
 
     0.801
TDE_1298
Cyclic nucleotide binding domain protein; Identified by match to protein family HMM PF00027.
 
 
 
 0.790
TDE_2659
GAF domain/HD domain protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966.
 
 
 0.776
TDE_0412
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
Your Current Organism:
Treponema denticola
NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.