node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TDE_0173 | ftsZ | TDE_0173 | TDE_1204 | FtsK/SpoIIIE family protein; Identified by similarity to SP:P21458; match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.584 |
TDE_0173 | topA | TDE_0173 | TDE_1208 | FtsK/SpoIIIE family protein; Identified by similarity to SP:P21458; match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.658 |
TDE_0173 | xerC | TDE_0173 | TDE_1209 | FtsK/SpoIIIE family protein; Identified by similarity to SP:P21458; match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.592 |
TDE_0173 | xerD | TDE_0173 | TDE_1205 | FtsK/SpoIIIE family protein; Identified by similarity to SP:P21458; match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | Integrase/recombinase XerD; Identified by similarity to SP:P21891; match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.568 |
TDE_0972 | TDE_1207 | TDE_0972 | TDE_1207 | comF-related protein. | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | 0.875 |
TDE_0972 | xerC | TDE_0972 | TDE_1209 | comF-related protein. | Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.561 |
TDE_0972 | xerD | TDE_0972 | TDE_1205 | comF-related protein. | Integrase/recombinase XerD; Identified by similarity to SP:P21891; match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.561 |
TDE_1206 | TDE_1207 | TDE_1206 | TDE_1207 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | 0.779 |
TDE_1206 | ftsZ | TDE_1206 | TDE_1204 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.522 |
TDE_1206 | hslU | TDE_1206 | TDE_1211 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.545 |
TDE_1206 | hslV | TDE_1206 | TDE_1210 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | Heat shock protein HslVU, ATP-dependent protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.546 |
TDE_1206 | topA | TDE_1206 | TDE_1208 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.740 |
TDE_1206 | xerC | TDE_1206 | TDE_1209 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.718 |
TDE_1206 | xerD | TDE_1206 | TDE_1205 | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | Integrase/recombinase XerD; Identified by similarity to SP:P21891; match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.773 |
TDE_1207 | TDE_0972 | TDE_1207 | TDE_0972 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | comF-related protein. | 0.875 |
TDE_1207 | TDE_1206 | TDE_1207 | TDE_1206 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | TPR domain protein; Identified by similarity to SP:Q57105; match to protein family HMM PF00515. | 0.779 |
TDE_1207 | ftsZ | TDE_1207 | TDE_1204 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.654 |
TDE_1207 | hslU | TDE_1207 | TDE_1211 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.673 |
TDE_1207 | hslV | TDE_1207 | TDE_1210 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | Heat shock protein HslVU, ATP-dependent protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.714 |
TDE_1207 | topA | TDE_1207 | TDE_1208 | DNA processing protein DprA, putative; Identified by similarity to OMNI:TP0393; match to protein family HMM PF02481; match to protein family HMM TIGR00732. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.948 |