STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (491 aa)    
Predicted Functional Partners:
glgC
Glucose-1-phosphate adenylyltransferase; Identified by similarity to SP:P30521; match to protein family HMM PF00483.
 
 
 0.998
malQ
4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
 
 
 0.978
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
  
 0.971
TDE_0101
Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; Belongs to the glycosyl hydrolase 13 family.
  
 0.947
TDE_1094
Conserved hypothetical protein; Identified by similarity to OMNI:TP0358; match to protein family HMM PF02651; match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family.
 
 
 0.933
TDE_2678
Identified by match to protein family HMM PF00128; match to protein family HMM TIGR01612.
 
  
 0.869
TDE_0051
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465.
   
  
 0.787
TDE_1579
Fibronectin/fibrinogen-binding protein, internal deletion; Identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833.
       0.655
TDE_1580
Conserved hypothetical protein; Identified by similarity to SP:O83494.
       0.655
TDE_1581
Membrane protein, putative; Identified by similarity to SP:O83493.
       0.655
Your Current Organism:
Treponema denticola
NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405
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