STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0480Predicted coding region TP0480; Hypothetical protein; identified by Glimmer; putative. (162 aa)    
Predicted Functional Partners:
TP_0481
Predicted coding region TP0481; Hypothetical protein; identified by Glimmer; putative.
 
     0.918
TP_0482
Predicted coding region TP0482; Hypothetical protein; identified by Glimmer; putative.
       0.752
TP_0073
Predicted coding region TP0073; Hypothetical protein; identified by Glimmer; putative.
  
    0.602
TP_0854
Predicted coding region TP0854; Hypothetical protein; identified by Glimmer; putative.
  
     0.548
TP_0479
Predicted coding region TP0479; Hypothetical protein; identified by Glimmer; putative.
       0.540
TP_0333
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 31.40; identified by sequence similarity; putative.
 
     0.534
TP_0915
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 26.71; identified by sequence similarity; putative.
  
     0.512
TP_0147
Alpha-amylase 1, putative; Similar to SP:P09961 PID:2689 percent identity: 27.92; identified by sequence similarity; putative.
  
     0.489
TP_0934
Glutamate transporter, putative; Similar to GB:AE000783 percent identity: 19.74; identified by sequence similarity; putative; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.482
TP_0995
Cyclic nucleotide binding protein; Similar to PID:1653946 percent identity: 33.90; identified by sequence similarity; putative.
  
     0.470
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.