STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1763Chemotaxis protein MotB-related protein; Similar to GB:AE000657; identified by sequence similarity; putative. (244 aa)    
Predicted Functional Partners:
VC_0892
Chemotaxis protein PomA; Similar to PID:2130948; identified by sequence similarity; putative.
  
 0.986
VC_1764
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.956
VC_1760
Helicase, putative; Similar to GB:AL009126; identified by sequence similarity; putative.
 
     0.922
VC_1602
Chemotaxis protein CheV; Similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837; identified by sequence similarity; putative.
  
  
 0.836
VC_0097
Flagellar protein FliL, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.827
VC_2127
Flagellar protein FliL, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.827
VC_2518
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
   0.814
VC_1762
Hypothetical protein; Identified by Glimmer2; putative.
       0.799
VC_2006
Chemotaxis protein CheV; Similar to GB:AE000511 PID:2313494; identified by sequence similarity; putative.
  
  
 0.789
VC_2202
Chemotaxis protein CheV; Similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837; identified by sequence similarity; putative.
  
  
 0.789
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.