STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliG1Flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1536. (332 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1868.
 
 0.999
fliF1
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 0.999
CV_3002
Probable flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1886.
 
 0.994
fliN
Flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1886.
 
 0.994
fliF2
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 0.988
fliE
Flagellar hook-basal body complex protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1677.
 
 
 0.988
flgJ
Flagellar protein flgJ; Identified by sequence similarity; putative; ORF located using Blastx/COG1705.
 
  
 0.978
flgG1
Flagellar basal-body rod protein FlgG; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1749; Belongs to the flagella basal body rod proteins family.
 
 
 0.977
flgG2
Flagellar basal-body rod protein flgG; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1749; Belongs to the flagella basal body rod proteins family.
 
 
 0.976
flgC2
Flagellar basal-body rod protein flgC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1558; Belongs to the flagella basal body rod proteins family.
 
  
 0.967
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.