node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CV_4226 | CV_4227 | CV_4226 | CV_4227 | Probable sugar-phosphate nucleotidyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1208. | Hypothetical protein. | 0.762 |
CV_4226 | CV_4228 | CV_4226 | CV_4228 | Probable sugar-phosphate nucleotidyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1208. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3178. | 0.999 |
CV_4226 | ruvC | CV_4226 | CV_4225 | Probable sugar-phosphate nucleotidyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1208. | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.796 |
CV_4227 | CV_4226 | CV_4227 | CV_4226 | Hypothetical protein. | Probable sugar-phosphate nucleotidyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1208. | 0.762 |
CV_4227 | CV_4228 | CV_4227 | CV_4228 | Hypothetical protein. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3178. | 0.773 |
CV_4227 | ruvC | CV_4227 | CV_4225 | Hypothetical protein. | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.762 |
CV_4228 | CV_4226 | CV_4228 | CV_4226 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3178. | Probable sugar-phosphate nucleotidyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1208. | 0.999 |
CV_4228 | CV_4227 | CV_4228 | CV_4227 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3178. | Hypothetical protein. | 0.773 |
CV_4228 | ruvC | CV_4228 | CV_4225 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3178. | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.782 |
hemE | ruvC | CV_1122 | CV_4225 | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.674 |
oraA | recJ | CV_1606 | CV_2475 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608. | 0.649 |
oraA | recO | CV_1606 | CV_2069 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.735 |
oraA | recQ | CV_1606 | CV_0477 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | ATP-dependent DNA helicase recQ; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0514. | 0.627 |
oraA | ruvA | CV_1606 | CV_4223 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.763 |
oraA | ruvB | CV_1606 | CV_4215 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | Holliday junction DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.676 |
oraA | ruvC | CV_1606 | CV_4225 | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.835 |
recJ | oraA | CV_2475 | CV_1606 | Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.649 |
recJ | recO | CV_2475 | CV_2069 | Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608. | DNA repair protein; Involved in DNA repair and RecF pathway recombination. | 0.795 |
recJ | recQ | CV_2475 | CV_0477 | Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608. | ATP-dependent DNA helicase recQ; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0514. | 0.972 |
recJ | ruvA | CV_2475 | CV_4223 | Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.590 |