STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003809Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1648 aa)    
Predicted Functional Partners:
J056_002000
Calcium-transporting ATPase 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.973
J056_001090
GDT1 family protein.
    
 
 0.644
J056_002110
Meiotically up-regulated 89 protein; Belongs to the CDC50/LEM3 family.
    
 0.528
J056_003832
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  
 0.513
J056_003602
Calmodulin; Belongs to the calmodulin family.
   
 
 0.510
J056_002036
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
  
 
0.498
J056_002215
Uncharacterized protein.
      
 0.472
J056_003935
Elongation factor 2.
   
  
 0.460
J056_003853
Serine/threonine-protein phosphatase.
   
 
 0.452
J056_001253
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
 
      0.438
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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