STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_2691Putative adenylylsulfate reductase, alpha subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992. (532 aa)    
Predicted Functional Partners:
hydB
Fe-hydrogenase, beta subunit; Identified by similarity to OMNI:TM1425; match to protein family HMM PF00037; match to protein family HMM PF01512.
  
 
 0.992
saT
Sulfate adenylyltransferase; Identified by similarity to SP:O66036; match to protein family HMM PF01747; match to protein family HMM TIGR00339; Belongs to the sulfate adenylyltransferase family.
 
 
 0.986
CHY_2686
Putative sulfite reductase, iron-sulfur binding subunit; Identified by similarity to SP:P26476; match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.978
aprB
Adenylylsulfate reductase; Identified by similarity to GP:443816; match to protein family HMM PF00037.
    
  0.977
CHY_1372
Putative membrane protein; Identified by match to protein family HMM PF01127.
 
 0.964
dsrB
Dissimilatory sulfite reductase subunit B; Identified by similarity to GP:902748; match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02066.
 
 
 0.963
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.963
frdB2
Fumarate reductase, iron-sulfur subunit; Identified by similarity to SP:P00364; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.956
dsrA
Dissimilatory sulfite reductase alpha subunit; Identified by similarity to GP:902747; match to protein family HMM PF01077; match to protein family HMM TIGR02064.
 
 
 0.956
frdB1
Fumarate reductase, iron-sulfur subunit; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.949
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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