node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNO_1179 | pstS | DNO_1179 | DNO_1180 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Phosphate binding family protein. | 0.430 |
DNO_1179 | ruvA | DNO_1179 | DNO_1177 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.794 |
DNO_1179 | ruvB | DNO_1179 | DNO_1176 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.794 |
DNO_1179 | ruvC | DNO_1179 | DNO_1178 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.814 |
DNO_1179 | tolA | DNO_1179 | DNO_1173 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | TolA protein. | 0.670 |
DNO_1179 | tolB | DNO_1179 | DNO_1172 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.472 |
DNO_1179 | tolQ | DNO_1179 | DNO_1175 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | TolQ protein; Identified by match to protein family HMM PF01618. | 0.694 |
DNO_1179 | tolR | DNO_1179 | DNO_1174 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | TolR protein; Identified by match to protein family HMM PF02472. | 0.682 |
polA | recX | DNO_0206 | DNO_0287 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | RecX family regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.468 |
polA | ruvA | DNO_0206 | DNO_1177 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.496 |
polA | ruvB | DNO_0206 | DNO_1176 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.615 |
polA | ruvC | DNO_0206 | DNO_1178 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.591 |
pstS | DNO_1179 | DNO_1180 | DNO_1179 | Phosphate binding family protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | 0.430 |
pstS | ruvA | DNO_1180 | DNO_1177 | Phosphate binding family protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.453 |
pstS | ruvB | DNO_1180 | DNO_1176 | Phosphate binding family protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.430 |
pstS | ruvC | DNO_1180 | DNO_1178 | Phosphate binding family protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.430 |
pstS | tolQ | DNO_1180 | DNO_1175 | Phosphate binding family protein. | TolQ protein; Identified by match to protein family HMM PF01618. | 0.445 |
pstS | tolR | DNO_1180 | DNO_1174 | Phosphate binding family protein. | TolR protein; Identified by match to protein family HMM PF02472. | 0.418 |
recX | polA | DNO_0287 | DNO_0206 | RecX family regulatory protein; Modulates RecA activity; Belongs to the RecX family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.468 |
recX | ruvC | DNO_0287 | DNO_1178 | RecX family regulatory protein; Modulates RecA activity; Belongs to the RecX family. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.494 |