Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71056.1 | ABK72306.1 | MSMEG_0032 | MSMEG_0033 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.958 |
| ABK71056.1 | ABK73969.1 | MSMEG_0032 | MSMEG_0035 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | FHA domain protein; Identified by match to protein family HMM PF00498. | 0.795 |
| ABK71056.1 | ABK75945.1 | MSMEG_0032 | MSMEG_1928 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Identified by match to protein family HMM PF00481. | 0.512 |
| ABK71056.1 | fhaB | MSMEG_0032 | MSMEG_0034 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.951 |
| ABK71056.1 | garA | MSMEG_0032 | MSMEG_3647 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh. | 0.641 |
| ABK71056.1 | murC | MSMEG_0032 | MSMEG_4226 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.878 |
| ABK71056.1 | pbpA | MSMEG_0032 | MSMEG_0031 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Penicillin binding protein transpeptidase domain protein; Cell wall formation. Plays an important role in cell division and cell shape maintenance by cross-linking adjacent peptidoglycan chains through transpeptidation. | 0.999 |
| ABK71056.1 | pknA | MSMEG_0032 | MSMEG_0030 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine/threonine protein kinase PknA; Identified by match to protein family HMM PF00069. | 0.973 |
| ABK71056.1 | pknB | MSMEG_0032 | MSMEG_0028 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.978 |
| ABK71056.1 | wag31 | MSMEG_0032 | MSMEG_4217 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | 0.486 |
| ABK72306.1 | ABK71056.1 | MSMEG_0033 | MSMEG_0032 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.958 |
| ABK72306.1 | ABK73969.1 | MSMEG_0033 | MSMEG_0035 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | FHA domain protein; Identified by match to protein family HMM PF00498. | 0.829 |
| ABK72306.1 | fhaB | MSMEG_0033 | MSMEG_0034 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.957 |
| ABK72306.1 | garA | MSMEG_0033 | MSMEG_3647 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh. | 0.703 |
| ABK72306.1 | pbpA | MSMEG_0033 | MSMEG_0031 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Penicillin binding protein transpeptidase domain protein; Cell wall formation. Plays an important role in cell division and cell shape maintenance by cross-linking adjacent peptidoglycan chains through transpeptidation. | 0.969 |
| ABK72306.1 | pknA | MSMEG_0033 | MSMEG_0030 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine protein kinase PknA; Identified by match to protein family HMM PF00069. | 0.994 |
| ABK72306.1 | pknB | MSMEG_0033 | MSMEG_0028 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA. | 0.998 |
| ABK73969.1 | ABK71056.1 | MSMEG_0035 | MSMEG_0032 | FHA domain protein; Identified by match to protein family HMM PF00498. | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.795 |
| ABK73969.1 | ABK72306.1 | MSMEG_0035 | MSMEG_0033 | FHA domain protein; Identified by match to protein family HMM PF00498. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.829 |
| ABK73969.1 | ABK75945.1 | MSMEG_0035 | MSMEG_1928 | FHA domain protein; Identified by match to protein family HMM PF00498. | Identified by match to protein family HMM PF00481. | 0.542 |
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