Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK72190.1 | ABK72519.1 | MSMEG_0885 | MSMEG_0887 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.578 |
ABK72190.1 | ABK73245.1 | MSMEG_0885 | MSMEG_0886 | Conserved hypothetical protein. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.797 |
ABK72190.1 | ABK73969.1 | MSMEG_0885 | MSMEG_0035 | Conserved hypothetical protein. | FHA domain protein; Identified by match to protein family HMM PF00498. | 0.479 |
ABK72190.1 | ABK74109.1 | MSMEG_0885 | MSMEG_1642 | Conserved hypothetical protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.545 |
ABK72190.1 | ABK74282.1 | MSMEG_0885 | MSMEG_0888 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.653 |
ABK72190.1 | ABK75481.1 | MSMEG_0885 | MSMEG_0889 | Conserved hypothetical protein. | Succinic semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.633 |
ABK72190.1 | fhaB | MSMEG_0885 | MSMEG_0034 | Conserved hypothetical protein. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.479 |
ABK72190.1 | garA | MSMEG_0885 | MSMEG_3647 | Conserved hypothetical protein. | Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh. | 0.479 |
ABK72306.1 | ABK73245.1 | MSMEG_0033 | MSMEG_0886 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.872 |
ABK72306.1 | ABK73969.1 | MSMEG_0033 | MSMEG_0035 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | FHA domain protein; Identified by match to protein family HMM PF00498. | 0.829 |
ABK72306.1 | ABK74109.1 | MSMEG_0033 | MSMEG_1642 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.422 |
ABK72306.1 | fhaB | MSMEG_0033 | MSMEG_0034 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress. | 0.957 |
ABK72306.1 | garA | MSMEG_0033 | MSMEG_3647 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh. | 0.703 |
ABK72519.1 | ABK72190.1 | MSMEG_0887 | MSMEG_0885 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.578 |
ABK72519.1 | ABK73245.1 | MSMEG_0887 | MSMEG_0886 | Conserved hypothetical protein. | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | 0.564 |
ABK72519.1 | ABK74282.1 | MSMEG_0887 | MSMEG_0888 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.825 |
ABK72519.1 | ABK75481.1 | MSMEG_0887 | MSMEG_0889 | Conserved hypothetical protein. | Succinic semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.751 |
ABK73245.1 | ABK72190.1 | MSMEG_0886 | MSMEG_0885 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Conserved hypothetical protein. | 0.797 |
ABK73245.1 | ABK72306.1 | MSMEG_0886 | MSMEG_0033 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.872 |
ABK73245.1 | ABK72519.1 | MSMEG_0886 | MSMEG_0887 | Serine/threonine-protein kinase PknD; Identified by match to protein family HMM PF00069. | Conserved hypothetical protein. | 0.564 |
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