node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70741.1 | ABK73620.1 | MSMEG_4497 | MSMEG_4494 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | Conserved hypothetical protein. | 0.936 |
ABK70741.1 | ABK75085.1 | MSMEG_4497 | MSMEG_4495 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | 0.967 |
ABK70741.1 | era | MSMEG_4497 | MSMEG_4493 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.949 |
ABK70741.1 | gcvP | MSMEG_4497 | MSMEG_3642 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.438 |
ABK70741.1 | ybeY | MSMEG_4497 | MSMEG_4496 | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.987 |
ABK73620.1 | ABK70741.1 | MSMEG_4494 | MSMEG_4497 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | 0.936 |
ABK73620.1 | ABK75085.1 | MSMEG_4494 | MSMEG_4495 | Conserved hypothetical protein. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | 0.975 |
ABK73620.1 | era | MSMEG_4494 | MSMEG_4493 | Conserved hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.968 |
ABK73620.1 | ybeY | MSMEG_4494 | MSMEG_4496 | Conserved hypothetical protein. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.967 |
ABK75085.1 | ABK70741.1 | MSMEG_4495 | MSMEG_4497 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | 0.967 |
ABK75085.1 | ABK73620.1 | MSMEG_4495 | MSMEG_4494 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | Conserved hypothetical protein. | 0.975 |
ABK75085.1 | era | MSMEG_4495 | MSMEG_4493 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.973 |
ABK75085.1 | ybeY | MSMEG_4495 | MSMEG_4496 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.977 |
ABK75667.1 | gcvP | MSMEG_5385 | MSMEG_3642 | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.449 |
ABK75667.1 | rplK | MSMEG_5385 | MSMEG_1346 | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.429 |
ABK75667.1 | rplU | MSMEG_5385 | MSMEG_4625 | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.485 |
ABK75667.1 | rpsQ | MSMEG_5385 | MSMEG_1445 | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.876 |
ABK75667.1 | ybeY | MSMEG_5385 | MSMEG_4496 | Identified by match to protein family HMM PF00581; match to protein family HMM PF00753. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.915 |
era | ABK70741.1 | MSMEG_4493 | MSMEG_4497 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Identified by match to protein family HMM PF00013; match to protein family HMM PF02562. | 0.949 |
era | ABK73620.1 | MSMEG_4493 | MSMEG_4494 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Conserved hypothetical protein. | 0.968 |