Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70912.1 | ABK71297.1 | MSMEG_0619 | MSMEG_0624 | Ppe family protein; Identified by match to protein family HMM PF00823. | Identified by match to protein family HMM PF00082. | 0.630 |
| ABK70912.1 | ABK72989.1 | MSMEG_0619 | MSMEG_0618 | Ppe family protein; Identified by match to protein family HMM PF00823. | Pe family protein; Identified by match to protein family HMM PF00934. | 0.958 |
| ABK70912.1 | eccA3 | MSMEG_0619 | MSMEG_0615 | Ppe family protein; Identified by match to protein family HMM PF00823. | ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity). | 0.826 |
| ABK70912.1 | eccB3 | MSMEG_0619 | MSMEG_0616 | Ppe family protein; Identified by match to protein family HMM PF00823. | Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.919 |
| ABK70912.1 | eccC3 | MSMEG_0619 | MSMEG_0617 | Ppe family protein; Identified by match to protein family HMM PF00823. | Ftsk/spoiiie family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.917 |
| ABK70912.1 | eccE3 | MSMEG_0619 | MSMEG_0626 | Ppe family protein; Identified by match to protein family HMM PF00823. | Conserved hypothetical protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.808 |
| ABK70912.1 | espG3 | MSMEG_0619 | MSMEG_0622 | Ppe family protein; Identified by match to protein family HMM PF00823. | Putative DNA-binding protein; Belongs to the EspG family. | 0.741 |
| ABK70912.1 | esxG | MSMEG_0619 | MSMEG_0620 | Ppe family protein; Identified by match to protein family HMM PF00823. | Pe family protein; Belongs to the WXG100 family. CFP-10 subfamily. | 0.934 |
| ABK70912.1 | snm | MSMEG_0619 | MSMEG_0623 | Ppe family protein; Identified by match to protein family HMM PF00823. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.801 |
| ABK71297.1 | ABK70912.1 | MSMEG_0624 | MSMEG_0619 | Identified by match to protein family HMM PF00082. | Ppe family protein; Identified by match to protein family HMM PF00823. | 0.630 |
| ABK71297.1 | ABK72989.1 | MSMEG_0624 | MSMEG_0618 | Identified by match to protein family HMM PF00082. | Pe family protein; Identified by match to protein family HMM PF00934. | 0.538 |
| ABK71297.1 | eccA3 | MSMEG_0624 | MSMEG_0615 | Identified by match to protein family HMM PF00082. | ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity). | 0.868 |
| ABK71297.1 | eccB3 | MSMEG_0624 | MSMEG_0616 | Identified by match to protein family HMM PF00082. | Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.969 |
| ABK71297.1 | eccC3 | MSMEG_0624 | MSMEG_0617 | Identified by match to protein family HMM PF00082. | Ftsk/spoiiie family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.841 |
| ABK71297.1 | eccE3 | MSMEG_0624 | MSMEG_0626 | Identified by match to protein family HMM PF00082. | Conserved hypothetical protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.947 |
| ABK71297.1 | espG3 | MSMEG_0624 | MSMEG_0622 | Identified by match to protein family HMM PF00082. | Putative DNA-binding protein; Belongs to the EspG family. | 0.928 |
| ABK71297.1 | esxG | MSMEG_0624 | MSMEG_0620 | Identified by match to protein family HMM PF00082. | Pe family protein; Belongs to the WXG100 family. CFP-10 subfamily. | 0.873 |
| ABK71297.1 | snm | MSMEG_0624 | MSMEG_0623 | Identified by match to protein family HMM PF00082. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.918 |
| ABK72388.1 | eccA3 | MSMEG_6554 | MSMEG_0615 | Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021. | ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity). | 0.797 |
| ABK72388.1 | eccB3 | MSMEG_6554 | MSMEG_0616 | Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021. | Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. | 0.476 |
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