STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71545.1Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (298 aa)    
Predicted Functional Partners:
ABK72485.1
Methyltransferase, putative, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
   
0.806
ABK70915.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
   
0.788
ABK73326.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
   
0.785
ABK70498.1
Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234.
  
    0.493
ABK70106.1
Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724.
 
    0.455
snm
Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family.
  
    0.445
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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