Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70106.1 | ABK71680.1 | MSMEG_6235 | MSMEG_1888 | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.449 |
| ABK70106.1 | snm | MSMEG_6235 | MSMEG_0623 | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.531 |
| ABK70498.1 | ABK71680.1 | MSMEG_3218 | MSMEG_1888 | Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234. | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.463 |
| ABK70498.1 | snm | MSMEG_3218 | MSMEG_0623 | Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.606 |
| ABK70725.1 | ABK71680.1 | MSMEG_2346 | MSMEG_1888 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.505 |
| ABK71190.1 | ABK71680.1 | MSMEG_1889 | MSMEG_1888 | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.544 |
| ABK71190.1 | ABK73059.1 | MSMEG_1889 | MSMEG_1891 | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. | 0.962 |
| ABK71190.1 | ABK75470.1 | MSMEG_1889 | MSMEG_1892 | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Transferase; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily. | 0.670 |
| ABK71190.1 | aroA | MSMEG_1889 | MSMEG_1890 | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.983 |
| ABK71680.1 | ABK70106.1 | MSMEG_1888 | MSMEG_6235 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.449 |
| ABK71680.1 | ABK70498.1 | MSMEG_1888 | MSMEG_3218 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234. | 0.463 |
| ABK71680.1 | ABK70725.1 | MSMEG_1888 | MSMEG_2346 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.505 |
| ABK71680.1 | ABK71190.1 | MSMEG_1888 | MSMEG_1889 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.544 |
| ABK71680.1 | ABK73059.1 | MSMEG_1888 | MSMEG_1891 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. | 0.407 |
| ABK71680.1 | ABK75470.1 | MSMEG_1888 | MSMEG_1892 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Transferase; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily. | 0.411 |
| ABK71680.1 | ABK76030.1 | MSMEG_1888 | MSMEG_0362 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.409 |
| ABK71680.1 | aroA | MSMEG_1888 | MSMEG_1890 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.543 |
| ABK71680.1 | snm | MSMEG_1888 | MSMEG_0623 | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Secretion protein Snm4; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG; Belongs to the EccD/Snm4 family. | 0.409 |
| ABK73059.1 | ABK71190.1 | MSMEG_1891 | MSMEG_1889 | Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. | Putative ribosome small subunit-dependent GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.962 |
| ABK73059.1 | ABK71680.1 | MSMEG_1891 | MSMEG_1888 | Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. | Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.407 |
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